Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s037.g0140.t1 | 2-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE |
| Lsat_s037.g0141.t1 | CLASPIN |
| Lsat_s037.g0142.t1 | |
| Lsat_s037.g0143.t1 | |
| Lsat_s037.g0144.t1 | |
| Lsat_s037.g0145.t1 | |
| Lsat_s037.g0146.t1 | INSULINOMA-ASSOCIATED 1 |
| Lsat_s037.g0147.t1 | |
| Lsat_s037.g0148.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Lsat_s037.g0149.t1 | |
| Lsat_s037.g0150.t1 | INSULINOMA-ASSOCIATED 1 |
| Lsat_s037.g0151.t1 | |
| Lsat_s037.g0152.t1 | |
| Lsat_s037.g0153.t1 | TUBERIN |
| Lsat_s037.g0154.t1 | NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED |
| Lsat_s037.g0155.t1 | TRIOKINASE/FMN CYCLASE |
| Lsat_s037.g0156.t1 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| Lsat_s037.g0157.t1 | 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI |
| Lsat_s037.g0158.t1 | CADHERIN-23 |
| Lsat_s037.g0159.t1 | TRANSMEMBRANE PROTEIN 151 HOMOLOG |
| Lsat_s037.g0160.t1 | YNEIN REGULATORY COMPLEX SUBUNIT 5 |
| Lsat_s037.g0161.t1 | |
| Lsat_s037.g0162.t1 | MIS18-BINDING PROTEIN 1 |
| Lsat_s037.g0163.t1 | LACTOYLGLUTATHIONE LYASE GLYOXALASE I |
| Lsat_s037.g0164.t1 | UNCHARACTERIZED |
| Lsat_s037.g0165.t1 | L-ASPARAGINASE |
| Lsat_s037.g0166.t1 | ACTIN |
| Lsat_s037.g0167.t1 | |
| Lsat_s037.g0168.t1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| Lsat_s037.g0169.t1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| Lsat_s037.g0170.t1 | TRANSMEMBRANE PROTEIN 179 |
| Lsat_s037.g0171.t1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| Lsat_s037.g0172.t1 | ZINC TRANSPORTER 6 |
| Lsat_s037.g0173.t1 | |
| Lsat_s037.g0174.t1 | CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT GAMMA |
| Lsat_s037.g0175.t1 | BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN |
| Lsat_s037.g0176.t1 | |
| Lsat_s037.g0177.t1 | POLY A POLYMERASE |
| Lsat_s037.g0178.t1 | |
| Lsat_s037.g0179.t1 | MONOCARBOXYLATE TRANSPORTER |
| Lsat_s037.g0180.t1 | MONOCARBOXYLATE TRANSPORTER |
| Lsat_s037.g0181.t1 | HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 |
| Lsat_s037.g0182.t1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Lsat_s037.g0183.t1 | |
| Lsat_s037.g0184.t1 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 |
| Lsat_s037.g0185.t1 | |
| Lsat_s037.g0186.t1 | POTASSIUM CHANNEL, SUBFAMILY K |
| Lsat_s037.g0187.t1 | |
| Lsat_s037.g0188.t1 | POTASSIUM CHANNEL, SUBFAMILY K |
| Lsat_s037.g0189.t1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
