About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s037.g0090.t1NG5
Lsat_s037.g0091.t1
Lsat_s037.g0092.t1
Lsat_s037.g0093.t1PA-PL1 PHOSPHOLIPASE FAMILY
Lsat_s037.g0094.t1SMALL INTEGRAL MEMBRANE PROTEIN 12
Lsat_s037.g0095.t1
Lsat_s037.g0096.t1
Lsat_s037.g0097.t1CAMK FAMILY PROTEIN KINASE
Lsat_s037.g0098.t1ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26
Lsat_s037.g0099.t1
Lsat_s037.g0100.t1
Lsat_s037.g0101.t1ELONGATION FACTOR TU-RELATED
Lsat_s037.g0102.t1
Lsat_s037.g0103.t1SIN3B-RELATED
Lsat_s037.g0104.t1XANTHINE DEHYDROGENASE
Lsat_s037.g0105.t1
Lsat_s037.g0106.t1
Lsat_s037.g0107.t1MAD2L1-BINDING PROTEIN
Lsat_s037.g0108.t1
Lsat_s037.g0109.t1
Lsat_s037.g0110.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
Lsat_s037.g0111.t1SPERM-SPECIFIC FAMILY, CLASS Q
Lsat_s037.g0112.t1SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN
Lsat_s037.g0113.t1UPF0669 PROTEIN C6ORF120
Lsat_s037.g0114.t1CELL DEATH REGULATOR AVEN
Lsat_s037.g0115.t1BETA-GLUCURONIDASE
Lsat_s037.g0116.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
Lsat_s037.g0117.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s037.g0118.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s037.g0119.t1KREV INTERACTION TRAPPED 1-RELATED
Lsat_s037.g0120.t1
Lsat_s037.g0121.t1
Lsat_s037.g0122.t1
Lsat_s037.g0123.t1UNCHARACTERIZED
Lsat_s037.g0124.t1
Lsat_s037.g0125.t1
Lsat_s037.g0126.t1UNCHARACTERIZED
Lsat_s037.g0127.t1
Lsat_s037.g0128.t1
Lsat_s037.g0129.t1
Lsat_s037.g0130.t1
Lsat_s037.g0131.t1CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2
Lsat_s037.g0132.t1
Lsat_s037.g0133.t1TATA-BOX BINDING PROTEIN
Lsat_s037.g0134.t1PROTEASOME SUBUNIT ALPHA/BETA
Lsat_s037.g0135.t1LP21163P
Lsat_s037.g0136.t1TRICHOHYALIN-RELATED
Lsat_s037.g0137.t1P-SELECTIN GLYCOPROTEIN LIGAND-1
Lsat_s037.g0138.t1
Lsat_s037.g0139.t1
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