About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_40569-5.31ANKYRIN REPEAT CONTAINING
Bpl_scaf_40569-6.4RIBOFLAVIN TRANSPORTER RIBJ
Bpl_scaf_40569-6.5ACYL-COA DEHYDROGENASE
Bpl_scaf_40569-7.4G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_40569-7.8TETRASPANIN
Bpl_scaf_40569-7.9SODIUM/DICARBOXYLATE SYMPORTER-RELATED
Bpl_scaf_40569-8.13ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1
Bpl_scaf_40569-8.14UNCHARACTERIZED
Bpl_scaf_40569-8.29SUCCINYL-COA SYNTHETASE BETA CHAIN
Bpl_scaf_40569-8.3CX9C MOTIF-CONTAINING PROTEIN 4
Bpl_scaf_40569-9.3GLUTATHIONE REDUCTASE
Bpl_scaf_40569-9.4TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
Bpl_scaf_40570-0.0
Bpl_scaf_40572-0.16ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_40573-0.0
Bpl_scaf_40573-0.1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Bpl_scaf_40577-1.3
Bpl_scaf_40577-1.6UNCHARACTERIZED
Bpl_scaf_40579-0.6INTEGRIN ALPHA
Bpl_scaf_40579-0.7
Bpl_scaf_40582-1.4TYROSINASE FAMILY MEMBER
Bpl_scaf_40582-1.6TYROSINASE FAMILY MEMBER
Bpl_scaf_40582-2.2DNA POLYMERASE CATALYTIC SUBUNIT
Bpl_scaf_40582-3.1ADP RIBOSYLATION FACTOR-RELATED
Bpl_scaf_40583-0.6
Bpl_scaf_40583-0.7
Bpl_scaf_40583-10.5HEAT SHOCK PROTEIN HSP-12.2-RELATED
Bpl_scaf_40583-10.6PDZ DOMAIN-CONTAINING PROTEIN
Bpl_scaf_40583-11.10
Bpl_scaf_40583-11.27INO80 COMPLEX SUBUNIT C
Bpl_scaf_40583-11.29
Bpl_scaf_40583-11.4BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Bpl_scaf_40583-11.6BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Bpl_scaf_40583-2.13DNA2/NAM7 HELICASE FAMILY MEMBER
Bpl_scaf_40583-2.14MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
Bpl_scaf_40583-2.20
Bpl_scaf_40583-2.8
Bpl_scaf_40583-3.4LD33804P
Bpl_scaf_40583-3.7APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_40583-3.9MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
Bpl_scaf_40583-4.17RIBONUCLEASE
Bpl_scaf_40583-4.6LD33804P
Bpl_scaf_40583-5.1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Bpl_scaf_40583-6.14SOLEUCYL-TRNA SYNTHETASE
Bpl_scaf_40583-7.11CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Bpl_scaf_40583-7.4UNCHARACTERIZED
Bpl_scaf_40583-7.5CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Bpl_scaf_40583-8.4SERINE/THREONINE-PROTEIN KINASE NEK
Bpl_scaf_40583-9.11CARNITINE O-ACYLTRANSFERASE
Bpl_scaf_40583-9.13CARNITINE O-ACYLTRANSFERASE
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