About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_40585-0.8EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_40586-0.6
Bpl_scaf_40587-0.2
Bpl_scaf_40592-0.3TRNA (URACIL-5-)-METHYLTRANSFERASE
Bpl_scaf_40594-0.3
Bpl_scaf_40594-0.5DNA REPAIR PROTEIN RAD51 HOMOLOG 2
Bpl_scaf_40594-1.2
Bpl_scaf_40594-1.3ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_40594-1.526S PROTEASOME REGULATORY SUBUNIT
Bpl_scaf_40594-1.6
Bpl_scaf_40594-2.10
Bpl_scaf_40594-2.11PUTATIVE PHOSPHOTRANSFERASE
Bpl_scaf_40594-2.7DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_40594-3.16PUTATIVE PHOSPHOTRANSFERASE
Bpl_scaf_40594-3.17SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_40594-3.19NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Bpl_scaf_40594-3.29ZGC:195170
Bpl_scaf_40594-3.31DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Bpl_scaf_40595-10.0
Bpl_scaf_40595-10.10
Bpl_scaf_40595-10.11
Bpl_scaf_40595-10.3
Bpl_scaf_40595-11.11ADHESION G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_40595-11.19PENTRAXIN
Bpl_scaf_40595-11.20
Bpl_scaf_40595-11.7AGAP007109-PA
Bpl_scaf_40595-12.10
Bpl_scaf_40595-12.9
Bpl_scaf_40595-2.0
Bpl_scaf_40595-3.4
Bpl_scaf_40595-3.6TESTIS-EXPRESSED PROTEIN 15
Bpl_scaf_40595-5.1
Bpl_scaf_40595-5.29HISTONE H1
Bpl_scaf_40595-5.3HISTONE H1
Bpl_scaf_40595-5.30SOX100B
Bpl_scaf_40595-6.12RAB11-FAMILY INTERACTING PROTEIN
Bpl_scaf_40595-6.15
Bpl_scaf_40595-6.7ANKYRIN REPEAT PROTEIN
Bpl_scaf_40595-7.8LETHAL 2 GIANT LARVAE PROTEIN
Bpl_scaf_40595-8.10NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_40595-8.25NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_40595-8.26SYNAPTOTAGMIN
Bpl_scaf_40595-8.5NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_40595-8.6NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_40595-8.7NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_40595-9.0
Bpl_scaf_40595-9.10
Bpl_scaf_40595-9.4
Bpl_scaf_40597-0.1
Bpl_scaf_40631-0.3
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