About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4034-0.12SI:CH211-201H21.5-RELATED
Bpl_scaf_4034-0.13RING FINGER 10 FAMILY MEMBER
Bpl_scaf_4034-0.8
Bpl_scaf_40345-1.10CDC45-RELATED PROTEIN
Bpl_scaf_40345-1.11PTD012 PROTEIN
Bpl_scaf_40345-1.14D-DOPACHROME DECARBOXYLASE
Bpl_scaf_40345-1.16ANKYRIN REPEAT-CONTAINING
Bpl_scaf_40345-1.18
Bpl_scaf_40345-1.6MOLTING PROTEIN MLT-4
Bpl_scaf_40350-0.1VERTNIN
Bpl_scaf_40355-0.12-
Bpl_scaf_40355-0.7METALLO PHOSPHOESTERASE RELATED
Bpl_scaf_40355-1.14
Bpl_scaf_40355-1.18
Bpl_scaf_40355-1.19
Bpl_scaf_40366-0.8PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_40372-0.0
Bpl_scaf_40374-0.1
Bpl_scaf_40374-0.25
Bpl_scaf_40374-0.30
Bpl_scaf_40374-0.31
Bpl_scaf_40374-0.32
Bpl_scaf_40374-0.33
Bpl_scaf_40374-0.34
Bpl_scaf_40374-0.35L-GULONOLACTONE OXIDASE
Bpl_scaf_40388-0.0
Bpl_scaf_40388-0.10
Bpl_scaf_40388-0.12
Bpl_scaf_40388-0.13FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_40388-1.3
Bpl_scaf_40388-1.7
Bpl_scaf_40389-0.4
Bpl_scaf_40394-0.3BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_40394-0.4
Bpl_scaf_40394-1.11KRAB AND ZINC FINGER DOMAIN-CONTAINING
Bpl_scaf_40394-1.17BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_40394-1.20METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_40394-1.8
Bpl_scaf_40394-11.0THAP DOMAIN-CONTAINING
Bpl_scaf_40394-11.1MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED
Bpl_scaf_40394-12.10
Bpl_scaf_40394-12.11UNCHARACTERIZED NODULIN-LIKE PROTEIN
Bpl_scaf_40394-12.5
Bpl_scaf_40394-12.8CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_40394-12.9
Bpl_scaf_40394-16.1080 KDA MCM3-ASSOCIATED PROTEIN
Bpl_scaf_40394-16.12
Bpl_scaf_40394-16.7
Bpl_scaf_40394-16.9
Bpl_scaf_40394-17.11SUPPRESSION OF TUMORIGENICITY 7
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