About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_39710-2.25LD39211P
Bpl_scaf_39710-2.27CENTROBIN
Bpl_scaf_39710-2.28
Bpl_scaf_39710-2.30T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Bpl_scaf_3972-0.3
Bpl_scaf_39720-1.0
Bpl_scaf_39720-2.26MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_39729-0.0
Bpl_scaf_39729-0.17
Bpl_scaf_39729-0.7
Bpl_scaf_39729-1.0
Bpl_scaf_39729-1.13PROTEIN TORNADO 1
Bpl_scaf_39729-1.9
Bpl_scaf_39729-2.10
Bpl_scaf_39729-2.11
Bpl_scaf_39811-0.13
Bpl_scaf_39811-0.6
Bpl_scaf_39811-0.9
Bpl_scaf_39812-0.6METALLOPROTEASE INHIBITOR
Bpl_scaf_39812-0.7SYNAPSIN
Bpl_scaf_39812-1.12
Bpl_scaf_39812-1.15LD33804P
Bpl_scaf_39812-1.16NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT
Bpl_scaf_39812-1.2
Bpl_scaf_39812-1.25CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_39812-1.8COPPER AMINE OXIDASE
Bpl_scaf_39813-0.4SORTING NEXIN 17 AND 27
Bpl_scaf_39813-0.6NUCLEOTIDE KINASE
Bpl_scaf_39813-0.8
Bpl_scaf_39814-0.0
Bpl_scaf_39820-0.0CEREBELLIN-RELATED
Bpl_scaf_39822-0.0
Bpl_scaf_39823-0.1
Bpl_scaf_39823-0.4REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_39823-0.9RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_39823-1.5
Bpl_scaf_39823-2.0ZGC:195170
Bpl_scaf_39823-2.7
Bpl_scaf_39824-0.5HISTONE ACETYLTRANSFERASE
Bpl_scaf_39827-0.2COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_39832-0.2-
Bpl_scaf_39834-0.3-
Bpl_scaf_39834-1.0
Bpl_scaf_39834-2.6MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_39834-3.10
Bpl_scaf_39834-3.17POTE ANKYRIN DOMAIN
Bpl_scaf_39834-3.5AGAP008228-PA
Bpl_scaf_39839-0.1NEUROPEPTIDES RECEPTOR
Bpl_scaf_39844-0.13AGAP001331-PA-RELATED
Bpl_scaf_39844-0.3ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
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