About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_39502-0.14TYROSINASE FAMILY MEMBER
Bpl_scaf_39502-0.15
Bpl_scaf_39502-0.3
Bpl_scaf_39510-0.3CRUMBS FAMILY MEMBER
Bpl_scaf_39510-0.4CRUMBS FAMILY MEMBER
Bpl_scaf_39515-0.18
Bpl_scaf_39515-0.19GLUTAMINASE
Bpl_scaf_39523-0.0ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_39524-0.1PUTATIVE-RELATED
Bpl_scaf_39524-0.3
Bpl_scaf_39524-1.2
Bpl_scaf_39524-1.4CARBOHYDRATE SULFOTRANSFERASE 15
Bpl_scaf_39524-2.5CENTLEIN
Bpl_scaf_39524-3.3DISCONNECTED-RELATED
Bpl_scaf_39524-3.4
Bpl_scaf_39524-5.13METAXIN RELATED
Bpl_scaf_39524-5.15F20B24.22
Bpl_scaf_39524-5.23MYOSIN
Bpl_scaf_39524-5.24MYOSIN
Bpl_scaf_39524-5.25MYOSIN
Bpl_scaf_39524-5.26ADP-DEPENDENT GLUCOKINASE
Bpl_scaf_39524-5.9BONUS, ISOFORM C-RELATED
Bpl_scaf_39524-6.11DISEASE RESISTANCE PROTEIN RP
Bpl_scaf_39524-6.2HILLARIN
Bpl_scaf_39524-6.20UNCHARACTERIZED
Bpl_scaf_39524-6.25HILLARIN
Bpl_scaf_39524-6.28UNCHARACTERIZED
Bpl_scaf_39524-6.4HOMEOBOX PROTEIN EMX-RELATED
Bpl_scaf_39524-6.8INNER MEMBRANE PROTEIN, PROBABLE PERMEASE
Bpl_scaf_39531-0.1THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Bpl_scaf_39531-0.5
Bpl_scaf_39531-0.6UNCHARACTERIZED
Bpl_scaf_39546-0.0ZGC:195170
Bpl_scaf_39546-0.14SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
Bpl_scaf_39546-0.15SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_39560-0.11
Bpl_scaf_39560-0.12CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_39560-0.14
Bpl_scaf_39560-0.15
Bpl_scaf_39560-0.20CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_39560-0.5
Bpl_scaf_3957-0.18GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Bpl_scaf_3957-0.5GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Bpl_scaf_39570-0.22
Bpl_scaf_39570-0.29
Bpl_scaf_39570-0.31OS10G0105400 PROTEIN
Bpl_scaf_39570-0.33OS10G0105400 PROTEIN
Bpl_scaf_39570-0.34
Bpl_scaf_39580-0.0
Bpl_scaf_39580-0.10TRANSMEMBRANE PROTEIN 180
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