About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_39844-1.28KERATINOCYTE-ASSOCIATED PROTEIN 2
Bpl_scaf_39844-1.2960S RIBOSOMAL PROTEIN L24
Bpl_scaf_39844-2.10LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
Bpl_scaf_39844-3.13POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
Bpl_scaf_39844-3.14F-BOX/WD REPEAT-CONTAINING PROTEIN 5
Bpl_scaf_39844-3.15C2 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_39845-0.2PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Bpl_scaf_39849-0.3
Bpl_scaf_39850-0.0PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_39850-0.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_39852-0.0
Bpl_scaf_39852-0.1
Bpl_scaf_39855-0.4
Bpl_scaf_39855-1.3
Bpl_scaf_39855-1.6DISCOIDIN-1 SUBUNIT A-RELATED-RELATED
Bpl_scaf_39855-2.3
Bpl_scaf_39855-3.15MIP08469P
Bpl_scaf_39855-3.2
Bpl_scaf_39855-3.20
Bpl_scaf_39855-3.35
Bpl_scaf_39855-3.37
Bpl_scaf_39855-3.4
Bpl_scaf_39855-3.5
Bpl_scaf_39855-3.9T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Bpl_scaf_39873-0.1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Bpl_scaf_39883-0.0
Bpl_scaf_39883-0.3MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_39898-0.4KREMEN PROTEIN
Bpl_scaf_39938-0.0
Bpl_scaf_39957-0.0
Bpl_scaf_39973-0.0PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_39984-0.11NEUROLIGIN
Bpl_scaf_39984-0.19NEUROLIGIN
Bpl_scaf_39984-0.7L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_39984-0.9NEUROLIGIN
Bpl_scaf_39991-0.2IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_39991-0.4
Bpl_scaf_39999-0.1PROLINE IMINOPEPTIDASE
Bpl_scaf_40-0.4
Bpl_scaf_40005-0.0CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_40016-0.10
Bpl_scaf_40016-0.11
Bpl_scaf_40016-0.7
Bpl_scaf_40021-0.7
Bpl_scaf_40053-0.6COLLAGEN ALPHA
Bpl_scaf_40063-0.13NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3
Bpl_scaf_40075-0.4
Bpl_scaf_40082-0.0
Bpl_scaf_40082-0.4
Bpl_scaf_40082-0.7
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