About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_40442-0.4
Bpl_scaf_40442-2.10ANKYRIN REPEAT PROTEIN
Bpl_scaf_4045-0.0
Bpl_scaf_4045-0.2
Bpl_scaf_4055-0.10AMINOTRANSFERASE
Bpl_scaf_4055-0.2
Bpl_scaf_4055-0.20AMINOTRANSFERASE
Bpl_scaf_4055-0.3
Bpl_scaf_4055-0.6
Bpl_scaf_4055-0.7
Bpl_scaf_40566-0.3NEURON-DERIVED NEUROTROPHIC FACTOR
Bpl_scaf_40567-0.2
Bpl_scaf_40568-0.10PROTEIN CBG16327
Bpl_scaf_40568-0.4GAMMA-SECRETASE SUBUNIT APH-1
Bpl_scaf_40568-1.13CONDENSIN-2 COMPLEX SUBUNIT H2
Bpl_scaf_40568-1.18ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
Bpl_scaf_40568-1.19LIPASE MATURATION FACTOR
Bpl_scaf_40568-1.9-
Bpl_scaf_40569-0.3
Bpl_scaf_40569-1.0
Bpl_scaf_40569-1.1
Bpl_scaf_40569-1.10METHYLTRANSFERASE TYPE 11
Bpl_scaf_40569-1.11
Bpl_scaf_40569-1.2
Bpl_scaf_40569-1.9COFILIN-RELATED
Bpl_scaf_40569-10.132'-DEOXYNUCLEOSIDE 5'-PHOSPHATE N-HYDROLASE 1
Bpl_scaf_40569-10.6INHIBITOR OF APOPTOSIS
Bpl_scaf_40569-10.7ADP-RIBOSYLGLYCOHYDROLASE
Bpl_scaf_40569-11.1PROLINE OXIDASE
Bpl_scaf_40569-12.11PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Bpl_scaf_40569-12.13ERO1-RELATED
Bpl_scaf_40569-12.14G PROTEIN-COUPLED RECEPTOR 157-RELATED
Bpl_scaf_40569-12.25
Bpl_scaf_40569-12.26PUTATIVE-RELATED
Bpl_scaf_40569-13.14
Bpl_scaf_40569-13.16UNCHARACTERIZED
Bpl_scaf_40569-13.18
Bpl_scaf_40569-2.5SPHINGOMYELIN SYNTHETASE
Bpl_scaf_40569-3.0
Bpl_scaf_40569-3.15
Bpl_scaf_40569-3.16
Bpl_scaf_40569-3.9PROPERDIN
Bpl_scaf_40569-4.11ZGC:153352
Bpl_scaf_40569-4.22ALDEHYDE DEHYDROGENASE-RELATED
Bpl_scaf_40569-5.10PROPERDIN
Bpl_scaf_40569-5.11EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
Bpl_scaf_40569-5.13MOLTING PROTEIN MLT-4
Bpl_scaf_40569-5.15GH11358P
Bpl_scaf_40569-5.272'-DEOXYNUCLEOSIDE 5'-PHOSPHATE N-HYDROLASE 1
Bpl_scaf_40569-5.30NORRIN
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