About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_40634-0.0
Bpl_scaf_40634-0.4
Bpl_scaf_40634-0.5
Bpl_scaf_40640-0.0
Bpl_scaf_40640-0.1
Bpl_scaf_4065-0.13
Bpl_scaf_4065-0.3
Bpl_scaf_4065-0.4
Bpl_scaf_40664-0.3KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Bpl_scaf_40670-0.167,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Bpl_scaf_40670-0.17OS10G0105400 PROTEIN
Bpl_scaf_40678-0.0
Bpl_scaf_40678-0.5TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Bpl_scaf_40684-0.3VASCULAR CELL ADHESION MOLECULE 1
Bpl_scaf_40703-0.6
Bpl_scaf_40704-0.3CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_40704-0.4
Bpl_scaf_40704-1.18
Bpl_scaf_40704-1.21
Bpl_scaf_40704-1.26
Bpl_scaf_40704-1.27SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_40704-2.3
Bpl_scaf_40704-3.4
Bpl_scaf_40704-3.6G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_40704-4.3G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_40704-4.4COLLAGEN ALPHA
Bpl_scaf_40704-4.5PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_40709-0.10SCAVENGER RECEPTOR CLASS F
Bpl_scaf_40709-0.11RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_40709-0.6RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_40717-0.10
Bpl_scaf_40717-0.13
Bpl_scaf_40733-0.2PROTEIN CBG10425
Bpl_scaf_40738-0.8
Bpl_scaf_40738-0.9CADHERIN-23
Bpl_scaf_40739-0.0
Bpl_scaf_40739-1.2MOLTING PROTEIN MLT-4
Bpl_scaf_40739-1.3ZINC FINGER PROTEIN 200
Bpl_scaf_40739-2.0
Bpl_scaf_40739-2.4
Bpl_scaf_40739-3.5ANKYRIN REPEAT PROTEIN
Bpl_scaf_40739-4.26
Bpl_scaf_40739-4.27B-CELL ANTIGEN RECEPTOR COMPLEX-ASSOCIATED PROTEIN
Bpl_scaf_40739-4.28ANKYRIN REPEAT PROTEIN
Bpl_scaf_40739-4.5
Bpl_scaf_40739-4.9
Bpl_scaf_40739-5.1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_40739-5.10
Bpl_scaf_40744-0.3
Bpl_scaf_40744-0.4ANTIGEN MLAA-22-RELATED
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