About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g23679
Clavulariidae_g2368CENTROSOMAL PROTEIN OF 85 KDA
Clavulariidae_g23680INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Clavulariidae_g23681COLLAGEN ALPHA
Clavulariidae_g23682
Clavulariidae_g23683
Clavulariidae_g23684DUF3504 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23685SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g23686
Clavulariidae_g23687REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23688
Clavulariidae_g23689
Clavulariidae_g2369ATP SYNTHASE DELTA CHAIN
Clavulariidae_g23690
Clavulariidae_g23691GH11602P
Clavulariidae_g23692PIKACHURIN-LIKE PROTEIN
Clavulariidae_g23693
Clavulariidae_g23694MACPF DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23695
Clavulariidae_g23696PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Clavulariidae_g23697
Clavulariidae_g23698
Clavulariidae_g23699-
Clavulariidae_g237ZINC FINGER AND SCAN DOMAIN-CONTAINING
Clavulariidae_g2370CELL DIVISION PROTEIN KINASE
Clavulariidae_g23700REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23701TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g23702TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g23703
Clavulariidae_g23704
Clavulariidae_g23705PROTEIN CBG26694
Clavulariidae_g23706
Clavulariidae_g23707
Clavulariidae_g23708
Clavulariidae_g23709
Clavulariidae_g2371UBIQUITIN-CONJUGATING ENZYME E2
Clavulariidae_g23710ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23711PROTEIN CBG26694
Clavulariidae_g23712PROTEIN CBG26694
Clavulariidae_g23713PENTRAXIN
Clavulariidae_g23714PROTEIN B, PUTATIVE-RELATED-RELATED
Clavulariidae_g23715REVERSE TRANSCRIPTASES
Clavulariidae_g23716
Clavulariidae_g23717SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g23718SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g23719SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g2372ARMADILLO-LIKE HELICAL DOMAIN-CONTAINING PROTEIN 2
Clavulariidae_g23720SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g23721SIMILAR TO RIKEN CDNA E130308A19
Clavulariidae_g23722
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