About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 286 287 288 289 290 291 292 293 294 295 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g23093ZINC FINGER PROTEIN
Clavulariidae_g23094
Clavulariidae_g23095TRANSPOSON
Clavulariidae_g23096TRANSPOSON
Clavulariidae_g2309752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Clavulariidae_g23098
Clavulariidae_g23099
Clavulariidae_g231ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g2310MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE
Clavulariidae_g23100
Clavulariidae_g23101
Clavulariidae_g23102THREE PRIME REPAIR EXONUCLEASE 1, 2
Clavulariidae_g23103KERATIN, ULTRA HIGH-SULFUR MATRIX PROTEIN-LIKE
Clavulariidae_g23104UNCHARACTERIZED
Clavulariidae_g23105PX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23106
Clavulariidae_g23107INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Clavulariidae_g23108ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23109EPHRIN TYPE-B RECEPTOR
Clavulariidae_g2311RNA-BINDING PROTEIN RELATED
Clavulariidae_g23110EPHRIN TYPE-B RECEPTOR
Clavulariidae_g23111EPHRIN TYPE-B RECEPTOR
Clavulariidae_g23112EGF-LIKE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23113
Clavulariidae_g23114EPHRIN TYPE-B RECEPTOR
Clavulariidae_g23115METABOTROPIC GLUTAMATE RECEPTOR
Clavulariidae_g23116
Clavulariidae_g23117PROTEIN PHOSPHATASE 2C
Clavulariidae_g23118ADP-RIBOSYLGLYCOHYDROLASE
Clavulariidae_g23119REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g2312DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED
Clavulariidae_g23120PROTOPORPHYRINOGEN OXIDASE
Clavulariidae_g23121UNCHARACTERIZED
Clavulariidae_g2312240S RIBOSOMAL PROTEIN S3A
Clavulariidae_g23123
Clavulariidae_g23124RETROTRANSPOSON
Clavulariidae_g23125
Clavulariidae_g23126
Clavulariidae_g23127CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Clavulariidae_g23128AAA-FAMILY ATPASE
Clavulariidae_g23129
Clavulariidae_g2313BCL2-ASSOCIATED ATHANOGENE
Clavulariidae_g23130REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23131TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 3
Clavulariidae_g23132SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23133
Clavulariidae_g23134
Clavulariidae_g23135SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g23136
Clavulariidae_g23137OS02G0260700 PROTEIN
TOP