About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 282 283 284 285 286 287 288 289 290 291 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g22913RETROTRANSPOSON
Clavulariidae_g22914UNCHARACTERIZED
Clavulariidae_g22915SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g22916EXPRESSED PROTEIN
Clavulariidae_g22917THAP DOMAIN PROTEIN
Clavulariidae_g22918TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g22919PROTEIN DD3-3
Clavulariidae_g2292MITOCHONDRIAL DIVISION PROTEIN 1-RELATED
Clavulariidae_g22920REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22921
Clavulariidae_g22922ENZYMATIC POLYPROTEIN-RELATED
Clavulariidae_g22923PROTEIN CBG26694
Clavulariidae_g22924
Clavulariidae_g22925REVERSE TRANSCRIPTASES
Clavulariidae_g22926
Clavulariidae_g22927
Clavulariidae_g22928
Clavulariidae_g22929CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g2293
Clavulariidae_g22930
Clavulariidae_g22931REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
Clavulariidae_g22932REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
Clavulariidae_g22933THAP DOMAIN-CONTAINING PROTEIN 6
Clavulariidae_g22934UNCHARACTERIZED
Clavulariidae_g2293552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Clavulariidae_g22936ENDONUCLEASE-RELATED
Clavulariidae_g22937REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22938MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
Clavulariidae_g22939ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g2294WILMS' TUMOR 1-ASSOCIATING PROTEIN
Clavulariidae_g22940
Clavulariidae_g22941PROTEIN CBG26694
Clavulariidae_g22942ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g22943
Clavulariidae_g22944COLLAGEN ALPHA
Clavulariidae_g22945INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Clavulariidae_g22946SI:CH211-266K2.1
Clavulariidae_g22947HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Clavulariidae_g22948THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
Clavulariidae_g22949TNF RECEPTOR ASSOCIATED FACTOR
Clavulariidae_g2295NEUROGENIC PROTEIN MASTERMIND
Clavulariidae_g22950WD40 REPEAT DOMAIN 95
Clavulariidae_g22951-
Clavulariidae_g22952AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Clavulariidae_g22953WINGED HELIX DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22954SEQUESTOSOME 1-RELATED
Clavulariidae_g22955TETRATRICOPEPTIDE REPEAT PROTEIN 29
Clavulariidae_g22956STEROL REGULATORY ELEMENT-BINDING PROTEIN
Clavulariidae_g22957ACYL-COA DEHYDROGENASE
Clavulariidae_g22958LIPOXYGENASE
TOP