About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59629UNCHARACTERIZED
Paelopatides59630G-PROTEIN COUPLED RECEPTOR
Paelopatides59631-
Paelopatides59632MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides59633RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Paelopatides59634-
Paelopatides59635PEPTIDASE
Paelopatides59636-
Paelopatides59637INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides59638-
Paelopatides59639-
Paelopatides59641-
Paelopatides59642-
Paelopatides59643-
Paelopatides59644UNCHARACTERIZED
Paelopatides59645-
Paelopatides59646ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides59647ATP-BINDING CASSETTE SUB-FAMILY B
Paelopatides59648ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides59649ABC TRANSPORTER B FAMILY
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