About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59650ABC TRANSPORTER B FAMILY
Paelopatides59651ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Paelopatides59652ATP-BINDING CASSETTE SUB-FAMILY B
Paelopatides59653ABC TRANSPORTER B FAMILY
Paelopatides59654PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59655C2H2 ZINC FINGER CGI-62-RELATED
Paelopatides59656PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG
Paelopatides59657RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
Paelopatides59658S-ANTIGEN PROTEIN
Paelopatides59659S-ANTIGEN PROTEIN
Paelopatides59660S-ANTIGEN PROTEIN
Paelopatides59661S-ANTIGEN PROTEIN
Paelopatides59662S-ANTIGEN PROTEIN
Paelopatides59663LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
Paelopatides59664SULFOTRANSFERASE SULT
Paelopatides59665RUVB-RELATED REPTIN AND PONTIN
Paelopatides59666-
Paelopatides59667CELL DIVISION CONTROL PROTEIN 6-RELATED
Paelopatides59668RETROTRANSPOSON
Paelopatides59669-
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