About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59527RETROTRANSPOSON
Paelopatides59528-
Paelopatides59529ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides59530MULTI-COPPER OXIDASE
Paelopatides59531MULTI-COPPER OXIDASE
Paelopatides59532PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59533-
Paelopatides59534-
Paelopatides59535METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides59536-
Paelopatides59537SI:CH211-196P9.1-RELATED
Paelopatides59538BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides59539-
Paelopatides59540-
Paelopatides59541-
Paelopatides59542UNCHARACTERIZED
Paelopatides59543-
Paelopatides59545DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Paelopatides59546PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59547TRANSMEMBRANE PROTEIN 42
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