About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59484REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59485VOLTAGE-GATED POTASSIUM CHANNEL
Paelopatides59486-
Paelopatides59487REVERSE TRANSCRIPTASES
Paelopatides59488-
Paelopatides59489PX DOMAIN-CONTAINING PROTEIN
Paelopatides59490-
Paelopatides59491REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59492-
Paelopatides59493ATP-DEPENDENT DNA HELICASE
Paelopatides59494-
Paelopatides59495F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59496UNCHARACTERIZED
Paelopatides59497-
Paelopatides59498RING FINGER PROTEIN 17
Paelopatides59499PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE
Paelopatides59500PROTEIN CBG26694
Paelopatides59501NANCE-HORAN SYNDROME PROTEIN
Paelopatides59502-
Paelopatides59503SPERM-SPECIFIC FAMILY, CLASS Q
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