About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59381-
Paelopatides59382DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
Paelopatides59383BREAST CANCER METASTASIS-SUPPRESSOR 1
Paelopatides59384FMS INTERACTING PROTEIN
Paelopatides59386RING FINGER PROTEIN-RELATED
Paelopatides59387UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides59388MYOSIN
Paelopatides59389-
Paelopatides59390-
Paelopatides59391RIKEN CDNA D130052B06 GENE
Paelopatides59392A-KINASE-INTERACTING PROTEIN 1
Paelopatides59393-
Paelopatides59394REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59395-
Paelopatides59396-
Paelopatides59397FRUCTOSE-2,6-BISPHOSPHATASE TIGAR
Paelopatides59398-
Paelopatides59399RETROTRANSPOSON
Paelopatides59400NETRIN RECEPTOR UNC5
Paelopatides59401INVERTED FORMIN-2
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