About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59316KELCH PROTEIN
Paelopatides59317-
Paelopatides59318-
Paelopatides59319FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides59320EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Paelopatides59321CALCIUM BINDING PROTEINS
Paelopatides59322-
Paelopatides59323-
Paelopatides59324-
Paelopatides59325ZINC FINGER PROTEIN 622
Paelopatides59326-
Paelopatides59327-
Paelopatides59328-
Paelopatides59329PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59330TRANS-GOLGI PROTEIN GMX33
Paelopatides59331GNAT FAMILY N-ACETYLTRANSFERASE
Paelopatides59332LEUCOKININ RECEPTOR-RELATED
Paelopatides59333TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides59334-
Paelopatides59335-
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