About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59212ENDONUCLEASE-RELATED
Paelopatides59213TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides59214MONOCARBOXYLATE TRANSPORTER
Paelopatides59215AD039 HT014 THIOREDOXIN FAMILY TRP26
Paelopatides59216-
Paelopatides59217TEKTIN
Paelopatides59218-
Paelopatides59219-
Paelopatides59220SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED
Paelopatides59221SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR
Paelopatides59222-
Paelopatides59223NEPHRIN
Paelopatides59224PROTEIN CBG26694
Paelopatides59225-
Paelopatides59226CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59227-
Paelopatides59228-
Paelopatides59229SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59230SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59231-
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