About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59151G-PROTEIN COUPLED RECEPTOR
Paelopatides59152-
Paelopatides59153-
Paelopatides59154REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59155-
Paelopatides59156HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides59157CENTROSOMAL PROTEIN 2
Paelopatides59158-
Paelopatides59160FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides5916152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides59162DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides59163NETRIN RECEPTOR UNC5
Paelopatides59164-
Paelopatides59165TAX1-BINDING PROTEIN 3-RELATED
Paelopatides59166ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59167-
Paelopatides59168REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59169INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides59170MITOCHONDRIA-EATING PROTEIN-RELATED
Paelopatides59171MITOCHONDRIA-EATING PROTEIN-RELATED
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