About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59029GEO11136P1-RELATED
Paelopatides59030ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING
Paelopatides59031-
Paelopatides59032-
Paelopatides59033NETRIN RECEPTOR UNC5
Paelopatides59034IP13529P
Paelopatides59035-
Paelopatides59036PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59037UNCHARACTERIZED
Paelopatides59038CXC2 DOMAIN-CONTAINING PROTEIN
Paelopatides59039-
Paelopatides59040ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Paelopatides59041MOLTING PROTEIN MLT-4
Paelopatides59042-
Paelopatides59043POLY ADP-RIBOSE GLYCOHYDROLASE
Paelopatides59044EPM2A-INTERACTING PROTEIN 1
Paelopatides59045-
Paelopatides59046DRONGO, ISOFORM F
Paelopatides59047-
Paelopatides59048-
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