About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59070-
Paelopatides59071REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59072-
Paelopatides59073-
Paelopatides59074-
Paelopatides59075PROTEIN CBG26694
Paelopatides59076PROTEIN CBG26694
Paelopatides59077CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59078CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59079-
Paelopatides59080-
Paelopatides59081MYOTUBULARIN-RELATED
Paelopatides59082REVERSE TRANSCRIPTASE
Paelopatides59083ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
Paelopatides59084-
Paelopatides59085ACTIVATOR OF BASAL TRANSCRIPTION 1
Paelopatides59086G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides59087-
Paelopatides59088REVERSE TRANSCRIPTASE
Paelopatides59089CHARGED MULTIVESICULAR BODY PROTEIN
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