About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58947-
Paelopatides58948PROTEIN CBG26694
Paelopatides58949-
Paelopatides58950-
Paelopatides58951-
Paelopatides58952-
Paelopatides58953PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides58954COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides58955UNCHARACTERIZED
Paelopatides58956N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides58957N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides58958UBIQUITIN LIGASE E3 ALPHA-RELATED
Paelopatides58959UBIQUITIN LIGASE E3 ALPHA-RELATED
Paelopatides58960UBIQUITIN LIGASE E3 ALPHA-RELATED
Paelopatides58961DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides58962SI:CH211-196P9.1-RELATED
Paelopatides58963SI:CH211-196P9.1-RELATED
Paelopatides58964TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides58965REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58966MYND-TYPE DOMAIN-CONTAINING PROTEIN
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