About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58886REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58887-
Paelopatides58888PARANEOPLASTIC ANTIGEN
Paelopatides58889POL PROTEIN
Paelopatides58890ENDONUCLEASE-RELATED
Paelopatides58891SH2-SH3 ADAPTOR PROTEIN-RELATED
Paelopatides58892REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58893-
Paelopatides58895-
Paelopatides58896-
Paelopatides58897-
Paelopatides58898REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58899BUCENTAUR RELATED
Paelopatides58900ATP-BINDING TRANSPORT PROTEIN-RELATED
Paelopatides58901L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides58902PHOSPHOGLYCERATE MUTASE-RELATED
Paelopatides58903PROTEIN HGH1 HOMOLOG
Paelopatides58904-
Paelopatides58905-
Paelopatides58906ENDONUCLEASE-RELATED
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