About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58786PROTEIN CBG26694
Paelopatides58787-
Paelopatides5878839S RIBOSOMAL PROTEIN L36, MITOCHONDRIAL
Paelopatides58789NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT
Paelopatides58790TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides58791EPM2A-INTERACTING PROTEIN 1
Paelopatides58792KIF1-BINDING PROTEIN
Paelopatides58793MYOSIN LIGHT CHAIN 1, 3
Paelopatides58794-
Paelopatides58795ACYL-COA-BINDING PROTEIN, ACBP
Paelopatides58796-
Paelopatides58797-
Paelopatides58798SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides58799ASTEROID PROTEIN
Paelopatides58800ADP RIBOSYLATION FACTOR-RELATED
Paelopatides58801-
Paelopatides58802TRANSPOSASE, PUTATIVE-RELATED
Paelopatides58803ARYLSULFATASE
Paelopatides58804ARYLSULFATASE
Paelopatides58805ANTI-SILENCING PROTEIN 1
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