About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58744CASEIN KINASE-RELATED
Paelopatides58745-
Paelopatides58746UNCHARACTERIZED
Paelopatides58747UNCHARACTERIZED
Paelopatides58748THYROID RECEPTOR INTERACTING PROTEIN RELATED
Paelopatides58749-
Paelopatides58750-
Paelopatides58751DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides58752-
Paelopatides58753-
Paelopatides58754VERY KIND PROTEIN
Paelopatides58755PUTATIVE-RELATED
Paelopatides58756DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Paelopatides58757DILUTE DOMAIN-CONTAINING PROTEIN YPR089W
Paelopatides58758CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN
Paelopatides58759CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN
Paelopatides58760THYROTROPH EMBRYONIC FACTOR RELATED
Paelopatides58761TRANSPOSON
Paelopatides58762-
Paelopatides58763AMPHIPHYSIN
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