About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58679SERINE/THREONINE-PROTEIN KINASE FRAY2
Paelopatides58680-
Paelopatides58682-
Paelopatides58683REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58684-
Paelopatides58685RAB GDP-DISSOCIATION INHIBITOR
Paelopatides58686-
Paelopatides58687KRAB AND ZINC FINGER DOMAIN-CONTAINING
Paelopatides58688ZINC FINGER AND SCAN DOMAIN-CONTAINING
Paelopatides58689-
Paelopatides58690ATAXIN 7 RELATED
Paelopatides58691UNCHARACTERIZED
Paelopatides58692MITOGEN-ACTIVATED PROTEIN KINASE
Paelopatides58693-
Paelopatides58694ADENOSYLHOMOCYSTEINASE
Paelopatides58695ADENOSYLHOMOCYSTEINASE
Paelopatides58696ADENOSYLHOMOCYSTEINASE
Paelopatides58697NUCLEAR RESPIRATORY FACTOR 1
Paelopatides58698SMALL LYSINE-RICH PROTEIN 1
Paelopatides58699PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2
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