About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58555FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58556-
Paelopatides58557NEURAL PROLIFERATION DIFFERENTIATION AND CONTROL PROTEIN-1 NPDC-1 PROTEIN
Paelopatides58558NEURAL PROLIFERATION DIFFERENTIATION AND CONTROL PROTEIN-1 NPDC-1 PROTEIN
Paelopatides58559PNAS-3 RELATED
Paelopatides58562-
Paelopatides58563ACETYL-COA C-ACYLTRANSFERASE
Paelopatides58564TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
Paelopatides58565BTB/POZ DOMAIN-CONTAINING PROTEIN 10-RELATED
Paelopatides58566-
Paelopatides58567PROTEIN CBG26694
Paelopatides58568DYNACTIN 1-RELATED MICROTUBULE-BINDING
Paelopatides58569REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58570-
Paelopatides58571PROTEIN CBG26694
Paelopatides58572PROTEIN CBG26694
Paelopatides58573NUCLEAR HORMONE RECEPTOR
Paelopatides58574LD27203P-RELATED
Paelopatides58575LD27203P-RELATED
Paelopatides58576INNER MEMBRANE TRANSPORTER YGJI-RELATED
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