About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58513ORGANIC ANION TRANSPORTER
Paelopatides58514-
Paelopatides58515UNCHARACTERIZED
Paelopatides58516DIACYLGLYCEROL KINASE
Paelopatides58517-
Paelopatides58518ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Paelopatides58519SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides58520S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM
Paelopatides58521-
Paelopatides58522BUCENTAUR RELATED
Paelopatides58523REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58524REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58525S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM
Paelopatides58526S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM
Paelopatides58527REVERSE TRANSCRIPTASES
Paelopatides58528CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1
Paelopatides58529ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58530MONOCARBOXYLATE TRANSPORTER
Paelopatides58531-
Paelopatides58534GABA-B RECEPTOR
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