About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58408EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides58409-
Paelopatides58410GLUTAMATE DECARBOXYLASE-RELATED
Paelopatides58411REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58412CADHERIN-23
Paelopatides58413-
Paelopatides58414SI:CH211-108C17.2-RELATED-RELATED
Paelopatides58415-
Paelopatides58416ATP-DEPENDENT DNA HELICASE
Paelopatides58417-
Paelopatides58418ATP-DEPENDENT DNA HELICASE
Paelopatides58419ATP-DEPENDENT DNA HELICASE
Paelopatides58420LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN
Paelopatides58421-
Paelopatides58422BROMODOMAIN-CONTAINING PROTEIN 8
Paelopatides58423CLARIN
Paelopatides58424CLARIN
Paelopatides58425-
Paelopatides58426PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED
Paelopatides58427FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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