About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58285FATTY ACID SYNTHASE
Paelopatides58286INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58287-
Paelopatides58288-
Paelopatides58289L-THREONINE ALDOLASE-RELATED
Paelopatides58290L-THREONINE ALDOLASE-RELATED
Paelopatides58291RIBOSOMAL PROTEIN L27
Paelopatides58292SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides58293PLEXIN
Paelopatides58294PLEXIN
Paelopatides58295BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides58296N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Paelopatides58297SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58298CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58299UNCHARACTERIZED
Paelopatides58300UNCHARACTERIZED
Paelopatides58301TRANSPOSON
Paelopatides58302-
Paelopatides58303NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
Paelopatides58304NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
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