About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58185ZINC FINGER CCHC DOMAIN-CONTAINING
Paelopatides58186ZINC FINGER CCHC DOMAIN-CONTAINING
Paelopatides58187ZINC FINGER CCHC DOMAIN-CONTAINING
Paelopatides58188BUCENTAUR RELATED
Paelopatides58189-
Paelopatides58190MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides58191PROTEIN CBG26694
Paelopatides58192-
Paelopatides58193OS05G0310600 PROTEIN
Paelopatides58194EPM2A-INTERACTING PROTEIN 1
Paelopatides58195-
Paelopatides58196CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides58197OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides58198REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58199-
Paelopatides58200MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42
Paelopatides58201XAP-5 PROTEIN-RELATED
Paelopatides58202-
Paelopatides58203FACIOGENITAL DYSPLASIA PROTEIN
Paelopatides58204FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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