About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58205FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58206FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides58207-
Paelopatides58208ENZYMATIC POLYPROTEIN-RELATED
Paelopatides58209CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58210ZGC:195170
Paelopatides58211SI:CH211-108C17.2-RELATED-RELATED
Paelopatides58212CATION TRANSPORT PROTEIN CHAC-RELATED
Paelopatides58213SERINE/THREONINE PROTEIN KINASE
Paelopatides58214-
Paelopatides58215-
Paelopatides58216-
Paelopatides58217-
Paelopatides58218-
Paelopatides58219-
Paelopatides58220COUNTIN RECEPTOR CNR3-RELATED
Paelopatides58221PROTEIN CBG26694
Paelopatides58222NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides58223L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides58224-
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