About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58225MYOSIN VII, XV
Paelopatides58226EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED
Paelopatides58227-
Paelopatides58228REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58229SOLUTE CARRIER FAMILY 25
Paelopatides58230ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN
Paelopatides58231-
Paelopatides58232NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides58233-
Paelopatides58234-
Paelopatides58235B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides58236CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58237CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58238-
Paelopatides58239MYOTUBULARIN-RELATED
Paelopatides58240ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
Paelopatides58241G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides58242-
Paelopatides58243-
Paelopatides58244-
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