About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58265NETRIN/LAMININ-RELATED
Paelopatides58266MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides58267REVERSE TRANSCRIPTASES
Paelopatides58268ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides58269FI04643P-RELATED
Paelopatides58270-
Paelopatides58271B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides58272L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides58273-
Paelopatides58274AGAP008221-PA
Paelopatides58275-
Paelopatides58276-
Paelopatides58277ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides58278-
Paelopatides58279-
Paelopatides58280XANTHINE DEHYDROGENASE
Paelopatides58281-
Paelopatides58282ZINC FINGER PROTEIN
Paelopatides58283HEAT SHOCK PROTEIN 70KDA
Paelopatides58284FATTY ACID SYNTHASE
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