About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58764AMPHIPHYSIN
Paelopatides58765-
Paelopatides58766TYROSINE-PROTEIN KINASE
Paelopatides58767NETRIN RECEPTOR UNC5
Paelopatides58768TYROSINE-PROTEIN KINASE
Paelopatides58769PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides58770DNA POLYMERASE EPSILON SUBUNIT 3
Paelopatides58773ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58774PROTEIN CBG26694
Paelopatides58775PROTEIN CBG26694
Paelopatides5877640S RIBOSOMAL PROTEIN S3A
Paelopatides58777FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58778-
Paelopatides58779CHARGED MULTIVESICULAR BODY PROTEIN
Paelopatides58780-
Paelopatides58781PROTEIN CBG26694
Paelopatides58782-
Paelopatides58783-
Paelopatides58784-
Paelopatides58785PROTEIN CBG26694
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