About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58866-
Paelopatides58867PROTEIN CBG26694
Paelopatides58868CENTROSOMAL PROTEIN OF 78 KDA
Paelopatides58869IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides58870IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides58871-
Paelopatides58872ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides58873REVERSE TRANSCRIPTASE
Paelopatides58874HEAT SHOCK PROTEIN 70KDA
Paelopatides58875-
Paelopatides58876HEAT SHOCK PROTEIN 70KDA
Paelopatides58877ENZYMATIC POLYPROTEIN-RELATED
Paelopatides58878-
Paelopatides58879L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides58880FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58881-
Paelopatides58882ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides58883FOLLISTATIN-RELATED
Paelopatides58884-
Paelopatides58885RNA BINDING MOTIF RBM PROTEIN -RELATED
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