About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58907ENZYMATIC POLYPROTEIN-RELATED
Paelopatides58908-
Paelopatides58909TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides58910-
Paelopatides58911REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58912V-TYPE ATP SYNTHASE SUBUNIT D
Paelopatides58913ARPIN
Paelopatides58914-
Paelopatides58915FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58916FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58917FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58918FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58919-
Paelopatides58920SI:CH211-196P9.1-RELATED
Paelopatides58921IP13529P
Paelopatides58922F5/8 TYPE C DOMAIN-CONTAINING PROTEIN
Paelopatides58923-
Paelopatides58924SI:CH211-196P9.1-RELATED
Paelopatides58925ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG
Paelopatides58926-
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