About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59130PROTEIN CBG26694
Paelopatides59132-
Paelopatides59133PROTEIN CBG26694
Paelopatides59134ENDONUCLEASE-RELATED
Paelopatides59135SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides59136POL PROTEIN
Paelopatides59137POL PROTEIN
Paelopatides59138POL PROTEIN
Paelopatides59139POL PROTEIN
Paelopatides59140POL PROTEIN
Paelopatides59141POL PROTEIN
Paelopatides59142POL PROTEIN
Paelopatides59143POL PROTEIN
Paelopatides59144POL PROTEIN
Paelopatides59145POL PROTEIN
Paelopatides59146POL PROTEIN
Paelopatides59147ENZYMATIC POLYPROTEIN-RELATED
Paelopatides59148ENDONUCLEASE-RELATED
Paelopatides59149SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides59150REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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