About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59273-
Paelopatides59274NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR
Paelopatides59275NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR
Paelopatides59276INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
Paelopatides59277ANILLIN/RHOTEKIN RTKN
Paelopatides59278EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED
Paelopatides59279-
Paelopatides59280-
Paelopatides5928152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides59282-
Paelopatides59283RETROTRANSPOSON
Paelopatides59284CATION TRANSPORT PROTEIN CHAC-RELATED
Paelopatides59285-
Paelopatides59286-
Paelopatides59287-
Paelopatides59288-
Paelopatides59289HELICASE SRCAP-RELATED
Paelopatides59290ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides59291HELICASE SRCAP-RELATED
Paelopatides59292HELICASE SRCAP-RELATED
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