About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59402-
Paelopatides59403-
Paelopatides59404-
Paelopatides59405DISCS LARGE
Paelopatides59406DISCS LARGE
Paelopatides59407DISCS LARGE
Paelopatides59408INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides59409IP13529P
Paelopatides59410C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED
Paelopatides59411-
Paelopatides59412BARRIER TO AUTOINTEGRATION FACTOR 2
Paelopatides59413POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides59414-
Paelopatides59415TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides59418PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59419OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides59420REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59421-
Paelopatides59422-
Paelopatides59423-
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