About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59548CCAAT/ENHANCER BINDING PROTEIN
Paelopatides59549-
Paelopatides59550HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides59551EXPRESSED PROTEIN
Paelopatides59552UNCHARACTERIZED
Paelopatides59553UNCHARACTERIZED
Paelopatides59554GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE
Paelopatides59555ARMADILLO-LIKE HELICAL DOMAIN CONTAINING PROTEIN 1
Paelopatides59556TAX1-BINDING PROTEIN 3-RELATED
Paelopatides59557-
Paelopatides59558-
Paelopatides59559-
Paelopatides59560-
Paelopatides59561SERINE/THREONINE-PROTEIN KINASE
Paelopatides59562DIPHTHAMIDE BIOSYNTHESIS PROTEIN
Paelopatides59563DIPHTHAMIDE BIOSYNTHESIS PROTEIN
Paelopatides59564STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Paelopatides59565ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides59566PROTEIN CBG26694
Paelopatides59567-
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