About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59609CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS
Paelopatides59610ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59611-
Paelopatides59612PLEXIN
Paelopatides59613-
Paelopatides59614PROTEIN CBG26694
Paelopatides59615TRANSPOSON
Paelopatides59616-
Paelopatides59617-
Paelopatides59618BONUS, ISOFORM C-RELATED
Paelopatides59619-
Paelopatides59620YTH YT521-B HOMOLOGY DOMAIN-CONTAINING
Paelopatides59621UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 2
Paelopatides59622SERINE INCORPORATOR
Paelopatides59623KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides59624REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59625BUCENTAUR RELATED
Paelopatides59626-
Paelopatides59627MICROSOMAL DIPEPTIDASE
Paelopatides59628-
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