About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59670PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides59671PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides59672CARBOHYDRATE SULFOTRANSFERASE
Paelopatides59673-
Paelopatides59674REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59675INSULIN-LIKE PEPTIDE 2-RELATED
Paelopatides59676REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59677-
Paelopatides59678-
Paelopatides59679POL PROTEIN
Paelopatides59680PROTEIN CBG26694
Paelopatides59681-
Paelopatides59682SI:CH211-196P9.1-RELATED
Paelopatides59683ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides59684-
Paelopatides59685-
Paelopatides59686POLYCYSTIN FAMILY MEMBER
Paelopatides59687PDF RECEPTOR-LIKE PROTEIN-RELATED
Paelopatides59688-
Paelopatides59689-
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