About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59690ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59691METHYLOSOME PROTEIN 50
Paelopatides59692METHYLOSOME PROTEIN 50
Paelopatides59693-
Paelopatides59694ENDONUCLEASE-RELATED
Paelopatides59695-
Paelopatides59696PEROXISOMAL MEMBRANE PROTEIN PEX13
Paelopatides59697WW DOMAIN BINDING PROTEIN 2, ISOFORM E
Paelopatides59698CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59699FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides59700-
Paelopatides59701ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59702ACYLTRANSFERASE
Paelopatides59705CYTOKINE RECEPTOR
Paelopatides59706CYTOKINE RECEPTOR
Paelopatides59707-
Paelopatides59708-
Paelopatides59709REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59710TRANSPOSON
Paelopatides59711-
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