About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 272 273 274 275 276 277 278 279 280 281 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g22463HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22464RAPSYN-RELATED
Clavulariidae_g22465
Clavulariidae_g22466ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g22467MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Clavulariidae_g22468CHLOROPHYLL SYNTHASE
Clavulariidae_g22469AMIDOPHOSPHORIBOSYLTRANSFERASE
Clavulariidae_g22475'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE
Clavulariidae_g22470MULTIFUNCTIONAL PROTEIN ADE2
Clavulariidae_g22471
Clavulariidae_g22472REGULATORY PROTEIN ZESTE
Clavulariidae_g22473
Clavulariidae_g22474DUF3504 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22475REVERSE TRANSCRIPTASES
Clavulariidae_g22476CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g22477ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22478SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g22479REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g2248PROTEIN SERAC1
Clavulariidae_g22480SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g22481TRANSPOSASE
Clavulariidae_g22482
Clavulariidae_g22483
Clavulariidae_g22484RAS-LIKE FAMILY MEMBER 11
Clavulariidae_g22485
Clavulariidae_g22486REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22487SORTILIN RELATED
Clavulariidae_g22488
Clavulariidae_g22489ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g2249
Clavulariidae_g22490METHYLTRANSFERASE
Clavulariidae_g22491RETROTRANSPOSON
Clavulariidae_g22492PROTEIN ARGININE N-METHYLTRANSFERASE
Clavulariidae_g22493
Clavulariidae_g22494GLPR-RELATED TRANSCRIPTIONAL REPRESSOR
Clavulariidae_g22495PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22496RETROTRANSPOSON
Clavulariidae_g22497
Clavulariidae_g22498
Clavulariidae_g22499INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Clavulariidae_g225SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g2250-
Clavulariidae_g22500REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22501PROTEIN ARGININE N-METHYLTRANSFERASE
Clavulariidae_g22502
Clavulariidae_g22503RETROTRANSPOSON
Clavulariidae_g22504
Clavulariidae_g22505SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g22506REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g22507PROTEIN CBG26694
TOP