About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56597REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56598-
Paelopatides56599-
Paelopatides56600-
Paelopatides56601MULTICOPPER OXIDASE-RELATED
Paelopatides56602TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides56603-
Paelopatides56604ENDONUCLEASE-RELATED
Paelopatides56605-
Paelopatides56606-
Paelopatides56607EXPRESSED PROTEIN
Paelopatides56608DNA2/NAM7 HELICASE FAMILY
Paelopatides56609MULTICOPPER OXIDASE-RELATED
Paelopatides56610-
Paelopatides56611MULTICOPPER OXIDASE-RELATED
Paelopatides56612BONUS, ISOFORM C-RELATED
Paelopatides56613-
Paelopatides56614SI:CH211-196P9.1-RELATED
Paelopatides56615IP13529P
Paelopatides56616REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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