About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56617ACROSIN-RELATED
Paelopatides56618ENDOGLIN/TGF-BETA RECEPTOR TYPE III
Paelopatides56619GAG-RELATED PROTEIN
Paelopatides56620UNCHARACTERIZED
Paelopatides56621UNCHARACTERIZED
Paelopatides56622-
Paelopatides56623UNCHARACTERIZED
Paelopatides56624-
Paelopatides56625IP14615P
Paelopatides56626CASEIN KINASE-RELATED
Paelopatides56627HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5
Paelopatides56628-
Paelopatides56629-
Paelopatides56630NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides56631REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56632-
Paelopatides56633-
Paelopatides566345'-NUCLEOTIDASE DOMAIN-CONTAINING
Paelopatides56635-
Paelopatides5663652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
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