About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56491REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56492TUBULIN
Paelopatides56493TUBULIN
Paelopatides56494MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56495-
Paelopatides56496-
Paelopatides56497PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED
Paelopatides56498STEROL DESATURASE
Paelopatides56499TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Paelopatides56500ENDONUCLEASE-RELATED
Paelopatides56501ENZYMATIC POLYPROTEIN-RELATED
Paelopatides56502-
Paelopatides56503INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides56504-
Paelopatides56505TYROSINE-PROTEIN KINASE
Paelopatides56506-
Paelopatides56508ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL
Paelopatides56509TUBULIN
Paelopatides56510TUBULIN
Paelopatides56511PHD-TYPE DOMAIN-CONTAINING PROTEIN
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